Simulate Genealogies from the coalescent

Documentation for package `genealogy' version 0.01

coal1	Generate a simple coalsecent tree for one population
coalmig	Generate trees from the symmetric island model.
coalsplit	Generate a tree with split times
cutdown	~~function to do ... ~~
gethapgrp	~~function to do ... ~~
meancoalwithinbetween	Calculate mean coalescence times within and between populations
meanheight	Calculate the pairwise mean height of a tree.
mutate	Put mutations on trees.
plot.inftree	~~function to do ... ~~
plot.poptree	Plot a migration tree.
plot.STRtree	Plot tree with STR haplotypes
plot.tree	Plot Genealogical Trees
rotatetree	Function to rotate nodes
simlinkedSTR	A Function to simulate linked STR loci from the coalescent
simtimeroot	~~function to do ... ~~